Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939689.1_cds_XP_016484186.1_75219
CDS Infomation

[gene=LOC107804769] [db_xref=GeneID:107804769] [protein=ATPase 9, plasma membrane-type] [protein_id=XP_016484186.1] [location=join(1220..1270,1933..2052,2147..2245,2339..2476,2997..3311,3422..3748,3849..3968,4061..4183,4264..4368,4463..4772,4859..5373,5457..5630,5832..6014,6107..6285,6899..6995)] [gbkey=CDS]
Sequence

ATGACGTCTAATTTATCATTAGAAGATATAAAAAATGAGCAAGTTGACCTTGAAAACATT
CCGGTGGAGGAAGTGTTTCAGCAGCTAAAATGTAGCAAAGAAGGATTATCATCTGAAGAG
GGCCAAAAAAGGATCCAAATATTTGGCCCCAACAAACTTGAAGAGAAAAAGGAGAACAAG
CTTCTCAAATTCTTGGGGTTTATGTGGAATCCTCTCTCATGGGTTATGGAATCAGCTGCT
ATTATGGCCATTGTTTTGGCCAATGGAGGAGGCAAGCCACCGGATTGGCCAGATTTCGTT
GGTATCACTGTATTGCTCATAATCAACTCTACTATCAGTTTTATTGAAGAAAATAATGCA
GGAAATGCTGCAGCTTCCCTTATGGCTAATCTTGCTCCCAAAACTAAGATTCTGAGAGAT
GGAAAATGGTCAGAGGAGGATGCCTCAATCTTGGTTCCAGGTGATCTTATTAGTATCAAG
TTGGGAGATATTGTCCCAGCCGATGCTCGTCTTCTTGAGGGTGATCCCCTCAAGATTGAT
CAGGCTGCACTCACTGGTGAGTCCTTACCTGTGACAAAGTTCCCTGGGGCTGAGGTTTTC
TCTGGTTCCACTGTCAAGCAAGGAGAAATCGAGGCAGTAGTCATCGCTACTGGTGTTCAC
ACCTTCTTTGGAAAGGCTGCTCATCTTGTAGATAGCACAAACCAAGTTGGTCATTTCCAA
AAGGTATTGACTGCAATCGGAAACTTCTGTATCTGCTCTATTGCTGTGGGAATGGTGATT
GAGATAGTGGTTATGTACCCAATCCAAAGGCGCAAATATAGAGATGGAATTGACAACTTG
CTTGTGTTGCTTATCGGAGGTATCCCAATTGCCATGCCAACAGTCTTGTCTGTGACAATG
GCTATTGGATCTCATAGGCTTGCACAACAAGGTGCCATTACAAAGAGAATGACTGCAATT
GAGGAAATGGCCGGTATGGATGTCCTTTGCAGTGACAAGACCGGTACTCTCACCCTCAAC
AAGCTCACCGTTGACAAAAATTTGATTGAGGTTTTCCCTAAAGATGCGGACAAGGATACC
GTTATGTTACTTGCTGCTAGGGCTTCCAGGGTTGAAAACCAAGATGCTATCGATGCTTGC
ATCGTTAACATGTTGGGTGATCCCAAGGAGGCAAGATCAGGCATCCAAGAGGTTCATTTC
TTACCTTTCAATCCGGTTGAAAAGCGCACAGCAATTACATATATTGATGACAAAGGAAAC
TGGCACAGGGCTAGCAAAGGAGCTCCTGAGCAAATTATTGAACTTTGTGAGCTCAAAGGA
GATATCAGGAAGAAGTCCTTAGATATCATCGACAGCTATGCCAACCGTGGTCTTCGTTCC
TTGGCTGTGGCAAGACAGACTGTACCAGAAAAGAGCAAGGAAAGCGATGGTTCACCTTGG
GAATTCGTTGGCCTTCTGCCCCTTTTTGATCCTCCAAGGCATGACAGTGCTGAAACAATC
CGCAAAGCTCTTGATCTTGGTGTTAATGTTAAGATGATCACTGGTGACCAGCTCGCCATC
GGTAAGGAAACTGCCCGTAGGCTTGGCATGGGAACCAACATGTATCCTTCTTCAGCTCTT
CTTGGAGAGCACAAAGATGCAGCCATTGCTTCAATTCCTGTCGATGAGCTCATTGAAAAG
GCAGATGGTTTTGCCGGAGTCTTCCCAGAGCATAAATATGAGATTGTGAAGAAGCTCCAA
GAAAGAAACCATATCTGCGGTATGACAGGAGATGGAGTGAACGATGCACCAGCACTAAAG
AAGGCAGACATTGGTATTGCTGTCGATGATGCAACAGACGCTGCCAGGAGTGCATCTGAT
ATCGTCTTGACTGAACCAGGTCTTAGTGTTATCGTGAGTGCTGTGTTGACAAGCAGAGCC
ATCTTCCAGAGGATGAAGAACTACACCATCTATGCAGTTTCCATCACAATCCGTGTCGTT
ATGGGATTCATGCTCATTGCCCTTATCTGGAAGTTCGACTTCTCGCCATTCATGGTCCTT
ATCATTGCCATACTCAATGATGGAACTATCATGACCATCTCTAAGGACAGGGTGAAACCA
TCTCCATTGCCCGATTCGTGGAAACTCAAAGAAATCTTTGCCACTGGTGTTGTACTCGGG
ACCTACCAAGCGATCATGACTGTTGTGTTCTTCTACCTTGCAGCTGACACTGATTTCTTC
TCTGAAAACTTCCATGTTAGATCAATCAGAAACTCTCCAACTGAGCTTACAGCTGCACTA
TACCTTCAAGTGAGCATTATTAGTCAAGCTCTCATCTTTGTGACCAGATCAAGAAGCTGG
TCATTCGTCGAACGCCCTGGCCTTATGCTTGTTGCTGCCTTCTTTGCCGCCCAATTGGTT
GCTACCGTGCTCGCTGTATATGCAAACTGGGAATTTGCCAGGATCAAGGGAGTTGGTTGG
GGATGGGCAGCAGTTATCTGGATCTACACTATTATTACCTATATCCCTCTTGATATTCTT
AAATTCATCATCCGTTTCGCTTTGAGTGGAAGGGCATGGGATTCAATGATCCAGAACAAG
ACTGCCTTCACAACCAAGAAGGACTATGGAAGGGGTGAAAGGGAAGCACAATGGGCTTTA
GCTCAACGTACACTTCACGGTCTCCAGACACCAGAAAACACTGGCCTATTCAATGACAAG
AACTACAGGGAATTGTCCGAGATTGCCGAGCAGGCTAAACGTCGTGCTGAAGTTGCAAGG
TTGAGAGAGCTACACACTCTAAAGGGACATGTTGAATCAGTGGTCAAGCTAAAGGGACTA
GATATTGAAACAATCCAACAACACTATACTGTCTAA

Peptide Sequence

PEP ID

XP_016484186.1
PEP Infomation

PREDICTED: ATPase 9, plasma membrane-type [Nicotiana tabacum]
Sequence

MTSNLSLEDIKNEQVDLENIPVEEVFQQLKCSKEGLSSEEGQKRIQIFGPNKLEEKKENK
LLKFLGFMWNPLSWVMESAAIMAIVLANGGGKPPDWPDFVGITVLLIINSTISFIEENNA
GNAAASLMANLAPKTKILRDGKWSEEDASILVPGDLISIKLGDIVPADARLLEGDPLKID
QAALTGESLPVTKFPGAEVFSGSTVKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQ
KVLTAIGNFCICSIAVGMVIEIVVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM
AIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFPKDADKDT
VMLLAARASRVENQDAIDACIVNMLGDPKEARSGIQEVHFLPFNPVEKRTAITYIDDKGN
WHRASKGAPEQIIELCELKGDIRKKSLDIIDSYANRGLRSLAVARQTVPEKSKESDGSPW
EFVGLLPLFDPPRHDSAETIRKALDLGVNVKMITGDQLAIGKETARRLGMGTNMYPSSAL
LGEHKDAAIASIPVDELIEKADGFAGVFPEHKYEIVKKLQERNHICGMTGDGVNDAPALK
KADIGIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRVV
MGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLG
TYQAIMTVVFFYLAADTDFFSENFHVRSIRNSPTELTAALYLQVSIISQALIFVTRSRSW
SFVERPGLMLVAAFFAAQLVATVLAVYANWEFARIKGVGWGWAAVIWIYTIITYIPLDIL
KFIIRFALSGRAWDSMIQNKTAFTTKKDYGRGEREAQWALAQRTLHGLQTPENTGLFNDK
NYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV

Transcript Sequence

Gene sequence data has not been registered.